Publications

Jacobo Rogado, Fernando Pozo, Kevin Troule, José Miguel Sánchez-Torres, Nuria Romero-Laorden, Rebeca Mondejar, Olga Donnay, Anabel Ballesteros, Vilma Pacheco-Barcia, Javier Aspa, Fátima Al-Shahrour, Arantzazu Alfranca, Ramon Colomer (2022). Peripheral Blood Mononuclear Cells Predict Therapeutic Efficacy of Immunotherapy in NSCLC. Cancers.

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Jose Manuel Rodriguez, Fernando Pozo, Daniel Cerdán-Vélez, Tomás Di Domenico, Jesús Vázquez, Michael L Tress (2021). APPRIS: selecting functionally important isoforms. Nucleic Acids Research.

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Laura Martinez Gomez, Fernando Pozo, Thomas A Walsh, Federico Abascal, Michael L Tress (2021). The clinical importance of tandem exon duplication-derived substitutions. Nucleic Acids Research.

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Fernando Pozo, Laura Martinez-Gomez, Thomas A Walsh, José Manuel Rodriguez, Tomas Di Domenico, Federico Abascal, Jesús Vazquez, Michael L Tress (2021). Assessing the functional relevance of splice isoforms. NAR Genomics and Bioinformatics.

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Adam Frankish, Mark Diekhans, Irwin Jungreis, Julien Lagarde, Jane E Loveland, Jonathan M Mudge, Cristina Sisu, James C Wright, Joel Armstrong, If Barnes, Andrew Berry, Alexandra Bignell, Carles Boix, Silvia Carbonell Sala, Fiona Cunningham, Tomás Di Domenico, Sarah Donaldson, Ian T Fiddes, Carlos García Girón, Jose Manuel Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Kevin L Howe, Toby Hunt, Osagie G Izuogu, Rory Johnson, Fergal J Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C P Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Ferriol Calvet Riera, Magali Ruffier, Bianca M Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Maxim Y Wolf, Jinuri Xu, Yucheng T Yang, Andrew Yates, Daniel Zerbino, Yan Zhang, Jyoti S Choudhary, Mark Gerstein, Roderic Guigó, Tim J P Hubbard, Manolis Kellis, Benedict Paten, Michael L Tress, Paul Flicek (2021). GENCODE 2021. Nucleic Acids Research.

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Fernando Pozo, Jose Manuel Rodriguez, Jesus Vazquez, Michael L Tress (2021). APPRIS principal isoforms and MANE Select transcripts in clinical variant interpretation. bioRxiv.

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Jose Manuel Rodriguez, Fernando Pozo, Tomas di Domenico, Jesus Vazquez, Michael L. Tress (2020). An analysis of tissue-specific alternative splicing at the protein level.

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Laura Martinez-Gomez, Federico Abascal, Irwin Jungreis, Fernando Pozo, Manolis Kellis, Jonathan M. Mudge, Michael L. Tress (2020). Few SINEs of life: Alu elements have little evidence for biological relevance despite elevated translation.

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Adam Frankish, Mark Diekhans, Anne-Maud Ferreira, Rory Johnson, Irwin Jungreis, Jane Loveland, Jonathan M. Mudge, Cristina Sisu, James Wright, Joel Armstrong, If Barnes, Andrew Berry, Alexandra Bignell, Silvia Carbonell Sala, Jacqueline Chrast, Fiona Cunningham, Tomás Di Domenico, Sarah Donaldson, Ian T. Fiddes, Carlos García Girón, Jose Manuel Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Toby Hunt, Osagie G. Izuogu, Julien Lagarde, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Jinuri Xu, Andrew Yates, Daniel Zerbino, Yan Zhang, Bronwen Aken, Jyoti S. Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Alexandre Reymond, Michael L. Tress, Paul Flicek (2019). GENCODE reference annotation for the human and mouse genomes.

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